16S rRNA sequencing of subgingival plaques from periodontal disease - SRA

SRX27066327: 16S rRNA sequencing of subgingival plaques from periodontal disease
1 ILLUMINA (Illumina NovaSeq 6000) run: 78,995 spots, 39.5M bases, 12.8Mb downloads

Design: 16S rRNA gene sequencing in people with different ages and periodontitis stages

Submitted by: the Second Xiangya Hospital

Study: Bidirectional effects of Bacteroides in health based on 16S rRNA gene sequencing in people with different ages and periodontitis stages

PRJNA1197762 • SRP551258 • All experiments • All runs

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This study aimed to collect patients with different stages of periodontitis and divide them into young and old groups. 16S rRNA sequencing was performed on their subgingival plaque, supplemented by LEfSe, Spearman correlation analysis and KEGG to detect the periodontal pathogenicity of Bacteroides at diverse periodontitis stages.

Sample:

SAMN45815071 • SRS23526980 • All experiments • All runs

Organism: Fusobacterium

Library:

Name: 15

Instrument: Illumina NovaSeq 6000

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 78,995 spots, 39.5M bases, 12.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR31704767	78,995	39.5M	12.8Mb	2024-12-13

ID:: 36542661

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